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C/EBPβ-induced alternative splicing of RCAN1 generates a potent TCR-T target in mesenchymal glioblastoma

  • Zujian Xiong
  • , Qinglin Kong
  • , Bhuvitha Chagantipati
  • , Amelia Stepniak
  • , Ambika P. Jaswal
  • , Chaim T. Sneiderman
  • , Yuanyuan Han
  • , Sydney A. Jackson
  • , Rebecca A. Raphael
  • , Wei Zhang
  • , Muzi Li
  • , Yapeng Chao
  • , Bin Qin
  • , Zeynep Dulkadir
  • , Lance Schwegman
  • , Yihao Zhang
  • , Chloe Kuminkoski
  • , Megan A. Mahlke
  • , Poulomi Nath
  • , Baoli Hu
  • Pascal O. Zinn, Megan Mantica, Sameer Agnihotri, Yael Nechemia-Arbely, Ian F. Pollack, Lora H. Rigatti, Thomas G. Forsthuber, Xuejun Li, Itay Raphael*, Gary Kohanbash*
*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

3 Scopus citations

Abstract

Glioblastoma (GBM) is an aggressive brain tumor with limited treatment options and a dismal prognosis. While immunotherapy has shown promise in treating some solid tumors, the treatment of GBM has been mostly unsuccessful because of a lack of targetable tumor antigens and high tumor heterogeneity. Here, we report RCAN1-4 as a novel tumor antigen derived from alternative splicing induced by the transcription factor C/EBPβ. Both C/EBPβ and RCAN1-4 are highly expressed in GBM and glioma stem cells as mesenchymal subtype hallmarks. We report an immunogenic HLA-A24-specific splicing junction epitope within exon 4 and exon 5 that is unique to RCAN1-4. This epitope was validated for its ability to stimulate T cell responses in HLA-A24+ donors and GBM patients, leading us to identify RCAN1-4-reactive T cell receptors (TCRs) for the construction of TCR-engineered T cells (TCR-T cells). Functional studies of TCR-Ts demonstrated the in vitro and in vivo killing of RCAN1-4pos GBM tumor cells, highlighting its potential as an immunotherapeutic target in mesenchymal GBM.

Original languageEnglish
Pages (from-to)94-113
Number of pages20
JournalCellular and Molecular Immunology
Volume23
Issue number1
DOIs
StatePublished - Jan 2026

Bibliographical note

Publisher Copyright:
© The Author(s) 2025.

Keywords

  • Alternative splicing
  • Antigen detection
  • GBM
  • RCAN1
  • TCR-T

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