De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

Brian J. Haas*, Alexie Papanicolaou, Moran Yassour, Manfred Grabherr, Philip D. Blood, Joshua Bowden, Matthew Brian Couger, David Eccles, Bo Li, Matthias Lieber, Matthew D. Macmanes, Michael Ott, Joshua Orvis, Nathalie Pochet, Francesco Strozzi, Nathan Weeks, Rick Westerman, Thomas William, Colin N. Dewey, Robert HenschelRichard D. Leduc, Nir Friedman, Aviv Regev

*Corresponding author for this work

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Biochemistry, Genetics and Molecular Biology