TY - JOUR
T1 - Levinthal's question revisited, and answered
AU - Ben-Naim, Arieh
PY - 2012
Y1 - 2012
N2 - Attempts to answer the Levinthal question "How proteins fold to give such a unique structure" are discussed. In the first part of this article, we focus on a few reasons as to why the solution to the protein-folding problem (PFP) has been elusive for a very long time. One is a result of the misinterpretation of Anfinsen's Thermodynamic hypothesis which led to the conclusion that the native structure of a protein must be at a global minimum of the Gibbs energy. The second is the result of the adherence to the hydrophobic paradigm, and at the same time ignoring a whole repertoire of hydrophilic effects. It is argued that switching from a target-based to a caused-based approach, and adopting the hydrophilic paradigm leads straightforwardly to a simple answer to Levinthal's question, as well as to a solution of the PFP.
AB - Attempts to answer the Levinthal question "How proteins fold to give such a unique structure" are discussed. In the first part of this article, we focus on a few reasons as to why the solution to the protein-folding problem (PFP) has been elusive for a very long time. One is a result of the misinterpretation of Anfinsen's Thermodynamic hypothesis which led to the conclusion that the native structure of a protein must be at a global minimum of the Gibbs energy. The second is the result of the adherence to the hydrophobic paradigm, and at the same time ignoring a whole repertoire of hydrophilic effects. It is argued that switching from a target-based to a caused-based approach, and adopting the hydrophilic paradigm leads straightforwardly to a simple answer to Levinthal's question, as well as to a solution of the PFP.
KW - Anfinsen's hypothesis
KW - Hydrophilic effects
KW - Hydrophilic forces
KW - Hydrophobic
KW - Levinthal's question
KW - Protein folding
UR - http://www.scopus.com/inward/record.url?scp=84863859936&partnerID=8YFLogxK
U2 - 10.1080/07391102.2012.674286
DO - 10.1080/07391102.2012.674286
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C2 - 22571437
AN - SCOPUS:84863859936
SN - 0739-1102
VL - 30
SP - 113
EP - 124
JO - Journal of Biomolecular Structure and Dynamics
JF - Journal of Biomolecular Structure and Dynamics
IS - 1
ER -