TY - JOUR
T1 - Low-temperature FTIR spectra and hydrogen bonds in polycrystalline adenosine and uridine
AU - Rozenberg, M.
AU - Jung, C.
AU - Shoham, G.
PY - 2005/2
Y1 - 2005/2
N2 - FTIR spectra of polycrystalline samples of adenosine and uridine, pure and containing small (<10%) quantity of N(O)H or N(O)D groups, were measured in KBr pellets from 4000 to 400 cm -1 at temperatures from 300 to 20 K. For the first time, the bands of narrow isotopically decoupled proton stretching vibration ν 1 mode of NH and OH groups were found and assigned to ordered hydrogen bonds according to crystal structural data for both nucleosides. The FTIR adenosine spectra in the out-of-plane bending proton ν 4 mode range (lower than 1000 cm -1) of N(O)H groups revealed at low temperature at least twice more bands, than in the ν 1 range, which are influenced by isotopic exchange and (or) cooling. Almost all of them have their counterparts in the N(O)D substance spectrum with an isotopic frequency ratio of 1.30-1.40. These bands were assigned to the differently H-bound disordered NH and OH protons, which could not be seen with crystal structural methods. The energy and length of different H-bonds were estimated from peak positions of both mode bands (as the red shift of ν 1 or blue shift of ν 4 relatively free molecules) with well-established empirical correlations between spectral, thermodynamic and structural parameters of hydrogen bonds. The results were compared with independent experimental data.
AB - FTIR spectra of polycrystalline samples of adenosine and uridine, pure and containing small (<10%) quantity of N(O)H or N(O)D groups, were measured in KBr pellets from 4000 to 400 cm -1 at temperatures from 300 to 20 K. For the first time, the bands of narrow isotopically decoupled proton stretching vibration ν 1 mode of NH and OH groups were found and assigned to ordered hydrogen bonds according to crystal structural data for both nucleosides. The FTIR adenosine spectra in the out-of-plane bending proton ν 4 mode range (lower than 1000 cm -1) of N(O)H groups revealed at low temperature at least twice more bands, than in the ν 1 range, which are influenced by isotopic exchange and (or) cooling. Almost all of them have their counterparts in the N(O)D substance spectrum with an isotopic frequency ratio of 1.30-1.40. These bands were assigned to the differently H-bound disordered NH and OH protons, which could not be seen with crystal structural methods. The energy and length of different H-bonds were estimated from peak positions of both mode bands (as the red shift of ν 1 or blue shift of ν 4 relatively free molecules) with well-established empirical correlations between spectral, thermodynamic and structural parameters of hydrogen bonds. The results were compared with independent experimental data.
KW - Adenosine
KW - H-bonding in solids
KW - Isotopic dilution
KW - Low-temperature FTIR
KW - Uridine
UR - http://www.scopus.com/inward/record.url?scp=11344272817&partnerID=8YFLogxK
U2 - 10.1016/j.saa.2004.05.024
DO - 10.1016/j.saa.2004.05.024
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C2 - 15649808
AN - SCOPUS:11344272817
SN - 1386-1425
VL - 61
SP - 733
EP - 741
JO - Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy
JF - Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy
IS - 4
ER -