modelRxiv: A Platform for the Dissemination and Interactive Display of Models

Keith D. Harris*, Guy Hadari, Gili Greenbaum

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Modelling the dynamics of biological processes is ubiquitous across the ecological and evolutionary disciplines. However, the increasing complexity of these models poses a challenge to the dissemination of model-derived results. Often only a small subset of model results are made available to the scientific community, with further exploration of the parameter space relying on local deployment of code supplied by the authors. This can be technically challenging, owing to the diversity of frameworks and environments in which models are developed. To address this issue, we developed a platform that serves as an interactive repository of biological models, called modelRxiv. To facilitate adding models to modelRxiv, we utilise large-language models (LLMs) to make the platform language-agnostic. The platform provides a unified interface for the analysis of models that do not require any technical understanding of the model implementation, thus improving the accessibility, reproducibility and validation of ecological and evolutionary models.

Original languageEnglish
Article numbere70042
JournalEcology Letters
Volume28
Issue number1
DOIs
StatePublished - Jan 2025

Bibliographical note

Publisher Copyright:
© 2024 The Author(s). Ecology Letters published by John Wiley & Sons Ltd.

Keywords

  • computational modelling
  • eco-evolutionary dynamics
  • modelling
  • modelling frameworks

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