Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)

Ioulia Santi; Christina Pavloudi; Maria Abagnale; Iñigo Azua; Zuriñe Baña; Mauro Bastianini; Caroline Belser; Kristel Berg; Jone Bilbao; Kimberley Bird; Caroline Broudin; Mathieu Camusat; Ibon Cancio; Louis Caray-Counil; Raffaella Casotti; Jade Castel; Thierry Comtet; Cymon J. Cox; Michael Cunliffe; Claire Daguin; Klaas Deneudt; Oihane Díaz de Cerio; Katrina Exter; Cécile Fauvelot; Yann Fontana; Miquel J. Frada; Pierre E. Galand; Roberto Gallia; Laurence Garczarek; Jose González Fernández; Laure Guillou; Hanneloor Heynderickx; Gil Koplovitz; Celine Labrune; Rune Lagaisse; Arnaud Laroquette; Lyvia Lescure; Eva Lopes; Melina Loulakaki; Bruno Louro; Catarina Magalhães; Francesca Margiotta; Hannah Moal; Alice Moussy; Fabrice Not; Isabella Percopo; Estefanía Paredes Rosendo; Erwan Péru; Julie Poulain; Kim Praebel; Fabienne Rigaut-Jalabert; Sarah Romac; Jadwiga Rzeznik-Orignac; Diana Sarno; Jesús Souza Troncoso; Eric Thiébaut; Wilfried Thomas; Andrzej Tkacz; Ferdinando Tramontano; Anna Chiara Trano; Patrick Wincker; Nicolas Pade

doi:10.3897/BDJ.14.e178484

Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)

Ioulia Santi^*
, Christina Pavloudi
, Maria Abagnale
, Iñigo Azua
, Zuriñe Baña
, Mauro Bastianini
, Caroline Belser
, Kristel Berg
, Jone Bilbao
, Kimberley Bird
, Caroline Broudin
, Mathieu Camusat
, Ibon Cancio
, Louis Caray-Counil
, Raffaella Casotti
, Jade Castel
, Thierry Comtet
, Cymon J. Cox
, Michael Cunliffe
, Claire Daguin

Klaas Deneudt, Oihane Díaz de Cerio, Katrina Exter, Cécile Fauvelot, Yann Fontana, Miquel J. Frada, Pierre E. Galand, Roberto Gallia, Laurence Garczarek, Jose González Fernández, Laure Guillou, Hanneloor Heynderickx, Gil Koplovitz, Celine Labrune, Rune Lagaisse, Arnaud Laroquette, Lyvia Lescure, Eva Lopes, Melina Loulakaki, Bruno Louro, Catarina Magalhães, Francesca Margiotta, Hannah Moal, Alice Moussy, Fabrice Not, Isabella Percopo, Estefanía Paredes Rosendo, Erwan Péru, Julie Poulain, Kim Praebel, Fabienne Rigaut-Jalabert, Sarah Romac, Jadwiga Rzeznik-Orignac, Diana Sarno, Jesús Souza Troncoso, Eric Thiébaut, Wilfried Thomas, Andrzej Tkacz, Ferdinando Tramontano, Anna Chiara Trano, Patrick Wincker, Nicolas Pade

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

Abstract

The European Marine Omics Biodiversity Observation Network (EMO BON) is a long-term genomic observatory run by the European Research Infrastructure European Marine Biological Resource Centre (EMBRC). It was established in 2021 to support the challenges of biodiversity observation and unsystematic management of biodiversity data in the European seas. EMO BON introduced and coordinated the systematic and harmonised observation of biodiversity amongst more than fourteen marine stations in the European coastline. Here, we report the next release (Release 2) of shotgun metagenomic data from seawater and sediment microbial communities.

Original language	English
Article number	e178484
Journal	Biodiversity Data Journal
Volume	14
DOIs	https://doi.org/10.3897/BDJ.14.e178484
State	Published - 2026

Bibliographical note

Publisher Copyright:
© Santi I et al.

Keywords

marine biodiversity
metagenomics
microorganisms
ocean observation
soft substrate
water column

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10.3897/BDJ.14.e178484

Cite this

Santi, I., Pavloudi, C., Abagnale, M., Azua, I., Baña, Z., Bastianini, M., Belser, C., Berg, K., Bilbao, J., Bird, K., Broudin, C., Camusat, M., Cancio, I., Caray-Counil, L., Casotti, R., Castel, J., Comtet, T., Cox, C. J., Cunliffe, M., ... Pade, N. (2026). Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2). Biodiversity Data Journal, 14, Article e178484. https://doi.org/10.3897/BDJ.14.e178484

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title = "Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)",

abstract = "The European Marine Omics Biodiversity Observation Network (EMO BON) is a long-term genomic observatory run by the European Research Infrastructure European Marine Biological Resource Centre (EMBRC). It was established in 2021 to support the challenges of biodiversity observation and unsystematic management of biodiversity data in the European seas. EMO BON introduced and coordinated the systematic and harmonised observation of biodiversity amongst more than fourteen marine stations in the European coastline. Here, we report the next release (Release 2) of shotgun metagenomic data from seawater and sediment microbial communities.",

keywords = "marine biodiversity, metagenomics, microorganisms, ocean observation, soft substrate, water column",

author = "Ioulia Santi and Christina Pavloudi and Maria Abagnale and I{\~n}igo Azua and Zuri{\~n}e Ba{\~n}a and Mauro Bastianini and Caroline Belser and Kristel Berg and Jone Bilbao and Kimberley Bird and Caroline Broudin and Mathieu Camusat and Ibon Cancio and Louis Caray-Counil and Raffaella Casotti and Jade Castel and Thierry Comtet and Cox, \{Cymon J.\} and Michael Cunliffe and Claire Daguin and Klaas Deneudt and Cerio, \{Oihane D{\'i}az de\} and Katrina Exter and C{\'e}cile Fauvelot and Yann Fontana and Frada, \{Miquel J.\} and Galand, \{Pierre E.\} and Roberto Gallia and Laurence Garczarek and Fern{\'a}ndez, \{Jose Gonz{\'a}lez\} and Laure Guillou and Hanneloor Heynderickx and Gil Koplovitz and Celine Labrune and Rune Lagaisse and Arnaud Laroquette and Lyvia Lescure and Eva Lopes and Melina Loulakaki and Bruno Louro and Catarina Magalh{\~a}es and Francesca Margiotta and Hannah Moal and Alice Moussy and Fabrice Not and Isabella Percopo and Rosendo, \{Estefan{\'i}a Paredes\} and Erwan P{\'e}ru and Julie Poulain and Kim Praebel and Fabienne Rigaut-Jalabert and Sarah Romac and Jadwiga Rzeznik-Orignac and Diana Sarno and Troncoso, \{Jes{\'u}s Souza\} and Eric Thi{\'e}baut and Wilfried Thomas and Andrzej Tkacz and Ferdinando Tramontano and Trano, \{Anna Chiara\} and Patrick Wincker and Nicolas Pade",

note = "Publisher Copyright: {\textcopyright} Santi I et al.",

year = "2026",

doi = "10.3897/BDJ.14.e178484",

language = "אנגלית",

volume = "14",

journal = "Biodiversity Data Journal",

issn = "1314-2836",

publisher = "Pensoft Publishers",

}

Santi, I, Pavloudi, C, Abagnale, M, Azua, I, Baña, Z, Bastianini, M, Belser, C, Berg, K, Bilbao, J, Bird, K, Broudin, C, Camusat, M, Cancio, I, Caray-Counil, L, Casotti, R, Castel, J, Comtet, T, Cox, CJ, Cunliffe, M, Daguin, C, Deneudt, K, Cerio, ODD, Exter, K, Fauvelot, C, Fontana, Y, Frada, MJ, Galand, PE, Gallia, R, Garczarek, L, Fernández, JG, Guillou, L, Heynderickx, H, Koplovitz, G, Labrune, C, Lagaisse, R, Laroquette, A, Lescure, L, Lopes, E, Loulakaki, M, Louro, B, Magalhães, C, Margiotta, F, Moal, H, Moussy, A, Not, F, Percopo, I, Rosendo, EP, Péru, E, Poulain, J, Praebel, K, Rigaut-Jalabert, F, Romac, S, Rzeznik-Orignac, J, Sarno, D, Troncoso, JS, Thiébaut, E, Thomas, W, Tkacz, A, Tramontano, F, Trano, AC, Wincker, P & Pade, N 2026, 'Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)', Biodiversity Data Journal, vol. 14, e178484. https://doi.org/10.3897/BDJ.14.e178484

TY - JOUR

T1 - Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)

AU - Santi, Ioulia

AU - Pavloudi, Christina

AU - Abagnale, Maria

AU - Azua, Iñigo

AU - Baña, Zuriñe

AU - Bastianini, Mauro

AU - Belser, Caroline

AU - Berg, Kristel

AU - Bilbao, Jone

AU - Bird, Kimberley

AU - Broudin, Caroline

AU - Camusat, Mathieu

AU - Cancio, Ibon

AU - Caray-Counil, Louis

AU - Casotti, Raffaella

AU - Castel, Jade

AU - Comtet, Thierry

AU - Cox, Cymon J.

AU - Cunliffe, Michael

AU - Daguin, Claire

AU - Deneudt, Klaas

AU - Cerio, Oihane Díaz de

AU - Exter, Katrina

AU - Fauvelot, Cécile

AU - Fontana, Yann

AU - Frada, Miquel J.

AU - Galand, Pierre E.

AU - Gallia, Roberto

AU - Garczarek, Laurence

AU - Fernández, Jose González

AU - Guillou, Laure

AU - Heynderickx, Hanneloor

AU - Koplovitz, Gil

AU - Labrune, Celine

AU - Lagaisse, Rune

AU - Laroquette, Arnaud

AU - Lescure, Lyvia

AU - Lopes, Eva

AU - Loulakaki, Melina

AU - Louro, Bruno

AU - Magalhães, Catarina

AU - Margiotta, Francesca

AU - Moal, Hannah

AU - Moussy, Alice

AU - Not, Fabrice

AU - Percopo, Isabella

AU - Rosendo, Estefanía Paredes

AU - Péru, Erwan

AU - Poulain, Julie

AU - Praebel, Kim

AU - Rigaut-Jalabert, Fabienne

AU - Romac, Sarah

AU - Rzeznik-Orignac, Jadwiga

AU - Sarno, Diana

AU - Troncoso, Jesús Souza

AU - Thiébaut, Eric

AU - Thomas, Wilfried

AU - Tkacz, Andrzej

AU - Tramontano, Ferdinando

AU - Trano, Anna Chiara

AU - Wincker, Patrick

AU - Pade, Nicolas

PY - 2026

Y1 - 2026

N2 - The European Marine Omics Biodiversity Observation Network (EMO BON) is a long-term genomic observatory run by the European Research Infrastructure European Marine Biological Resource Centre (EMBRC). It was established in 2021 to support the challenges of biodiversity observation and unsystematic management of biodiversity data in the European seas. EMO BON introduced and coordinated the systematic and harmonised observation of biodiversity amongst more than fourteen marine stations in the European coastline. Here, we report the next release (Release 2) of shotgun metagenomic data from seawater and sediment microbial communities.

AB - The European Marine Omics Biodiversity Observation Network (EMO BON) is a long-term genomic observatory run by the European Research Infrastructure European Marine Biological Resource Centre (EMBRC). It was established in 2021 to support the challenges of biodiversity observation and unsystematic management of biodiversity data in the European seas. EMO BON introduced and coordinated the systematic and harmonised observation of biodiversity amongst more than fourteen marine stations in the European coastline. Here, we report the next release (Release 2) of shotgun metagenomic data from seawater and sediment microbial communities.

KW - marine biodiversity

KW - metagenomics

KW - microorganisms

KW - ocean observation

KW - soft substrate

KW - water column

UR - https://www.scopus.com/pages/publications/105027955664

U2 - 10.3897/BDJ.14.e178484

DO - 10.3897/BDJ.14.e178484

M3 - ???researchoutput.researchoutputtypes.contributiontojournal.article???

C2 - 41624426

AN - SCOPUS:105027955664

SN - 1314-2836

VL - 14

JO - Biodiversity Data Journal

JF - Biodiversity Data Journal

M1 - e178484

ER -

Next release of the European Marine Omics Biodiversity Observation Network (EMO BON) shotgun metagenomic data from water and sediment samples (Release 2)

Abstract

Bibliographical note

Keywords

Access to Document

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