The FlyBase database of the Drosophila genome projects and community literature

William M. Gelbart; L. Bayraktaroglu; B. Bettencourt; K. Campbell; M. Crosby; D. Emmert; P. Hradecky; Y. Huang; S. Letovsky; B. Matthews; S. Russo; A. Schroeder; F. Smutniak; P. Zhou; M. Zytkovics; M. Ashburner; R. Drysdale; A. de Grey; R. Foulger; G. Millburn; C. Yamada; T. Kaufman; K. Matthews; D. Gilbert; G. Grumbling; V. Strelets; C. Shemen; G. Rubin; B. Berman; E. Frise; M. Gibson; N. Harris; J. Kaminker; S. Lewis; B. Marshall; S. Misra; C. Mungall; S. Prochnik; J. Richter; C. Smith; S. Shu; J. Tupy; C. Weil

doi:10.1093/nar/gkg094

The FlyBase database of the Drosophila genome projects and community literature

William M. Gelbart^*, L. Bayraktaroglu, B. Bettencourt, K. Campbell, M. Crosby, D. Emmert, P. Hradecky, Y. Huang, S. Letovsky, B. Matthews, S. Russo, A. Schroeder, F. Smutniak, P. Zhou, M. Zytkovics, M. Ashburner, R. Drysdale, A. de Grey, R. Foulger, G. MillburnC. Yamada, T. Kaufman, K. Matthews, D. Gilbert, G. Grumbling, V. Strelets, C. Shemen, G. Rubin, B. Berman, E. Frise, M. Gibson, N. Harris, J. Kaminker, S. Lewis, B. Marshall, S. Misra, C. Mungall, S. Prochnik, J. Richter, C. Smith, S. Shu, J. Tupy, C. Weil

^*Corresponding author for this work

Research output: Contribution to journal › Review article › peer-review

389 Scopus citations

Abstract

FlyBase (http://flybase.bio.indiana.edu/) provides an integrated view of the fundamental genomic and genetic data on the major genetic model Drosophila melanogaster and related species. FlyBase has primary responsibility for the continual reannotation of the D. melanogaster genome. The ultimate goal of the reannotation effort is to decorate the euchromatic sequence of the genome with as much biological information as is available from the community and from the major genome project centers. A complete revision of the annotations of the now-finished euchromatic genomic sequence has been completed. There are many points of entry to the genome within FlyBase, most notably through maps, gene products and ontologies, structured phenotypic and gene expression data, and anatomy.

Original language	English
Pages (from-to)	172-175
Number of pages	4
Journal	Nucleic Acids Research
Volume	31
Issue number	1
DOIs	https://doi.org/10.1093/nar/gkg094
State	Published - 1 Jan 2003
Externally published	Yes

Bibliographical note

Funding Information:
FlyBase is supported by grants from the National Institutes of Health (National Human Genome Research Institute) to W. M. Gelbart and the Medical Research Council, London to M. Ashburner. The Berkeley Drosophila Genome Project is supported by grants from the Department of Energy and from the National Institutes of Health (National Human Genome Research Institute) to G. M. Rubin.

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Gelbart, W. M., Bayraktaroglu, L., Bettencourt, B., Campbell, K., Crosby, M., Emmert, D., Hradecky, P., Huang, Y., Letovsky, S., Matthews, B., Russo, S., Schroeder, A., Smutniak, F., Zhou, P., Zytkovics, M., Ashburner, M., Drysdale, R., de Grey, A., Foulger, R., ... Weil, C. (2003). The FlyBase database of the Drosophila genome projects and community literature. Nucleic Acids Research, 31(1), 172-175. https://doi.org/10.1093/nar/gkg094

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title = "The FlyBase database of the Drosophila genome projects and community literature",

abstract = "FlyBase (http://flybase.bio.indiana.edu/) provides an integrated view of the fundamental genomic and genetic data on the major genetic model Drosophila melanogaster and related species. FlyBase has primary responsibility for the continual reannotation of the D. melanogaster genome. The ultimate goal of the reannotation effort is to decorate the euchromatic sequence of the genome with as much biological information as is available from the community and from the major genome project centers. A complete revision of the annotations of the now-finished euchromatic genomic sequence has been completed. There are many points of entry to the genome within FlyBase, most notably through maps, gene products and ontologies, structured phenotypic and gene expression data, and anatomy.",

author = "Gelbart, {William M.} and L. Bayraktaroglu and B. Bettencourt and K. Campbell and M. Crosby and D. Emmert and P. Hradecky and Y. Huang and S. Letovsky and B. Matthews and S. Russo and A. Schroeder and F. Smutniak and P. Zhou and M. Zytkovics and M. Ashburner and R. Drysdale and {de Grey}, A. and R. Foulger and G. Millburn and C. Yamada and T. Kaufman and K. Matthews and D. Gilbert and G. Grumbling and V. Strelets and C. Shemen and G. Rubin and B. Berman and E. Frise and M. Gibson and N. Harris and J. Kaminker and S. Lewis and B. Marshall and S. Misra and C. Mungall and S. Prochnik and J. Richter and C. Smith and S. Shu and J. Tupy and C. Weil",

note = "Funding Information: FlyBase is supported by grants from the National Institutes of Health (National Human Genome Research Institute) to W. M. Gelbart and the Medical Research Council, London to M. Ashburner. The Berkeley Drosophila Genome Project is supported by grants from the Department of Energy and from the National Institutes of Health (National Human Genome Research Institute) to G. M. Rubin.",

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Gelbart, WM, Bayraktaroglu, L, Bettencourt, B, Campbell, K, Crosby, M, Emmert, D, Hradecky, P, Huang, Y, Letovsky, S, Matthews, B, Russo, S, Schroeder, A, Smutniak, F, Zhou, P, Zytkovics, M, Ashburner, M, Drysdale, R, de Grey, A, Foulger, R, Millburn, G, Yamada, C, Kaufman, T, Matthews, K, Gilbert, D, Grumbling, G, Strelets, V, Shemen, C, Rubin, G, Berman, B, Frise, E, Gibson, M, Harris, N, Kaminker, J, Lewis, S, Marshall, B, Misra, S, Mungall, C, Prochnik, S, Richter, J, Smith, C, Shu, S, Tupy, J & Weil, C 2003, 'The FlyBase database of the Drosophila genome projects and community literature', Nucleic Acids Research, vol. 31, no. 1, pp. 172-175. https://doi.org/10.1093/nar/gkg094

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AU - Bayraktaroglu, L.

AU - Bettencourt, B.

AU - Campbell, K.

AU - Crosby, M.

AU - Emmert, D.

AU - Hradecky, P.

AU - Huang, Y.

AU - Letovsky, S.

AU - Matthews, B.

AU - Russo, S.

AU - Schroeder, A.

AU - Smutniak, F.

AU - Zhou, P.

AU - Zytkovics, M.

AU - Ashburner, M.

AU - Drysdale, R.

AU - de Grey, A.

AU - Foulger, R.

AU - Millburn, G.

AU - Yamada, C.

AU - Kaufman, T.

AU - Matthews, K.

AU - Gilbert, D.

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AU - Misra, S.

AU - Mungall, C.

AU - Prochnik, S.

AU - Richter, J.

AU - Smith, C.

AU - Shu, S.

AU - Tupy, J.

AU - Weil, C.

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The FlyBase database of the Drosophila genome projects and community literature

Abstract

Bibliographical note

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