TY - JOUR
T1 - Universality of biochemical feedback and its application to immune cells
AU - Erez, Amir
AU - Byrd, Tommy A.
AU - Vogel, Robert M.
AU - Altan-Bonnet, Grégoire
AU - Mugler, Andrew
N1 - Publisher Copyright:
© 2019 American Physical Society.
PY - 2019/2/26
Y1 - 2019/2/26
N2 - We map a class of well-mixed stochastic models of biochemical feedback in steady state to the mean-field Ising model near the critical point. The mapping provides an effective temperature, magnetic field, order parameter, and heat capacity that can be extracted from biological data without fitting or knowledge of the underlying molecular details. We demonstrate this procedure on fluorescence data from mouse T cells, which reveals distinctions between how the cells respond to different drugs. We also show that the heat capacity allows inference of the absolute molecule number from fluorescence intensity. We explain this result in terms of the underlying fluctuations, and we demonstrate the generality of our work.
AB - We map a class of well-mixed stochastic models of biochemical feedback in steady state to the mean-field Ising model near the critical point. The mapping provides an effective temperature, magnetic field, order parameter, and heat capacity that can be extracted from biological data without fitting or knowledge of the underlying molecular details. We demonstrate this procedure on fluorescence data from mouse T cells, which reveals distinctions between how the cells respond to different drugs. We also show that the heat capacity allows inference of the absolute molecule number from fluorescence intensity. We explain this result in terms of the underlying fluctuations, and we demonstrate the generality of our work.
UR - http://www.scopus.com/inward/record.url?scp=85062447756&partnerID=8YFLogxK
U2 - 10.1103/PhysRevE.99.022422
DO - 10.1103/PhysRevE.99.022422
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C2 - 30934371
AN - SCOPUS:85062447756
SN - 2470-0045
VL - 99
JO - Physical Review E
JF - Physical Review E
IS - 2
M1 - 022422
ER -