Abstract
A structural model of pentameric phospholamban (Plb) in a lipid bilayer has been derived using a combination of experimental data, obtained from ATR-FTIR site-directed dichroism, and the implementation of the resulting restraints during a molecular dynamics simulation. Plb (residues 24-52) has been synthesised incorporating a new label, 1-13C = 18O, at residues 42 and 43. We have not only determined the tilt of the helices, 10(±6)°, but also the relative orientation of the transmembrane segments, with an ω angle of -32(±10)°for L42. This angle is taken as zero in the direction of the helix tilt. Plb is a simple test case where site-directed dichroism has been applied to resolve the indeterminacy arising from the mutagenesis data available. The results presented point specifically to a single structural model for Plb. (C) 2000 Academic Press.
Original language | English |
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Pages (from-to) | 677-685 |
Number of pages | 9 |
Journal | Journal of Molecular Biology |
Volume | 300 |
Issue number | 4 |
DOIs | |
State | Published - 21 Jul 2000 |
Externally published | Yes |
Bibliographical note
Funding Information:This work was supported by a grant from the BBSRC and Wellcome to I.T.A.
Keywords
- Infrared spectroscopy
- Ion channel
- Molecular dynamics
- Phospholamban